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  5. TP20G01280.1

TP20G01280.1


Description : Elongation Factor G, domain II; Transcription factor, GTP-binding domain; Translation elongation factor EFTu-like, domain 2; Elongation factor EFG, domain V-like; Translation elongation factor EFG/EF2, domain IV [Interproscan].


Gene families : OG_01_0000545 (OrthoFinder) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP20G01280.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.55 tig00000144_g9047.t1 Protein biosynthesis.organelle translation... 0.07 OrthoFinder
Cpa|evm.model.tig00000144.56 tig00000144_g9047.t1 Elongation factor G-1, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre11.g467553 30775656 Elongation factor G, mitochondrial OS=Oryza sativa... 0.04 OrthoFinder
Cz02g19060.t1 No alias Translation elongation factor EFTu-like, domain 2;... 0.04 OrthoFinder
Cz11g15050.t1 No alias Translation elongation factor EFTu-like, domain 2;... 0.04 OrthoFinder
EOD36065 No alias Putative mitochondrial elongation factor [Ensembl]. 0.02 OrthoFinder
OT_07G04640.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.06 OrthoFinder
PTI_05G01620.1 No alias Elongation factor EFG, domain V-like; Transcription... 0.03 OrthoFinder
PTI_05G01780.1 No alias Elongation factor EFG, domain V-like; Transcription... 0.04 OrthoFinder
Sro29_g019050.1 Contig1384.g12748 Factor G 0.07 OrthoFinder
Sro29_g019080.1 Contig1384.g12751 Factor G 0.03 OrthoFinder
SymbC1.scaffold724.13 724.13 Elongation factor EFG, domain V-like; Transcription... 0.01 OrthoFinder
XM_002500024.1 MICPUN_54103, 54103 Translation elongation factor EFG/EF2, domain IV;... 0.02 OrthoFinder
lcl|BLLF01001080.1_cds_GFH16986.1_11463 HaLaN_13516, GFH16986 Elongation factor G1 0.04 OrthoFinder
lcl|BLLF01002476.1_cds_GFH24222.1_18699 HaLaN_21973, GFH24222 Elongation factor G, chloroplastic 0.03 OrthoFinder
lcl|BLLF01003741.1_cds_GFH28098.1_22575 HaLaN_26530, GFH28098 Elongation factor G1 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60325.1_4215 PRW60325 Elongation factor G-chloroplastic 0.06 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494318.1_4182 KAA8494318 Elongation factor G-2, mitochondrial 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493598.1_4360 KAA8493598 Elongation factor G 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 89 369
IPR041095 EFG_II 491 564
IPR000640 EFG_V-like 692 776
IPR005517 Transl_elong_EFG/EF2_IV 566 690
IPR004161 EFTu-like_2 411 478
No external refs found!