Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: TP19G02190.1 | |
Cluster | HCCA: Cluster_65 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
EOD05780 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
EOD06468 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD08607 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD09836 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD15375 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD16739 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
EOD19744 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD20807 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
EOD25053 | No alias | Light-harvesting family [Ensembl]. | 0.02 | OrthoFinder | |
EOD40541 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
Sro1207_g252450.1 | Contig242.g2948 | B binding protein L1818, chloroplastic | 0.03 | OrthoFinder | |
Sro132_g062570.1 | Contig2745.g22100 | Chloroplastic | 0.05 | OrthoFinder | |
Sro1347_g264950.1 | Contig4640.g34581 | B binding protein 6, chloroplastic | 0.04 | OrthoFinder | |
Sro1430_g271970.1 | Contig4579.g34184 | B binding protein L1818, chloroplastic | 0.02 | OrthoFinder | |
Sro149_g068330.1 | Contig259.g3201 | Chloroplastic | 0.02 | OrthoFinder | |
Sro149_g068340.1 | Contig259.g3202 | B binding protein L1818, chloroplastic | 0.02 | OrthoFinder | |
Sro1506_g278310.1 | Contig3888.g29862 | Chloroplastic | 0.03 | OrthoFinder | |
Sro234_g094380.1 | Contig3223.g25485 | Fucoxanthin-chlorophyll a-c binding protein | 0.02 | OrthoFinder | |
Sro2423_g327210.1 | Contig3569.g27581 | Chloroplastic | 0.05 | OrthoFinder | |
Sro412_g137900.1 | Contig2922.g23262 | Chloroplastic | 0.04 | OrthoFinder | |
Sro60_g034620.1 | Contig797.g8939 | Chloroplastic | 0.05 | OrthoFinder | |
Sro652_g181650.1 | Contig2024.g17318 | Chloroplastic | 0.04 | OrthoFinder | |
Sro656_g182410.1 | Contig256.g3152 | Chloroplastic | 0.02 | OrthoFinder | |
Sro698_g189300.1 | Contig480.g6500 | Chlorophyll a | 0.05 | OrthoFinder | |
Sro698_g189330.1 | Contig480.g6503 | Chloroplastic | 0.04 | OrthoFinder | |
Sro829_g208070.1 | Contig1016.g10166 | Chloroplastic | 0.04 | OrthoFinder | |
Sro844_g209920.1 | Contig403.g5457 | Chloroplastic | 0.04 | OrthoFinder | |
XM_002506509.1 | MICPUN_105009, 105009 | Chlorophyll a/b-binding protein (LI818R) | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
BP | GO:0006605 | protein targeting | IEP | Enrichment |
BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006621 | protein retention in ER lumen | IEP | Enrichment |
MF | GO:0008047 | enzyme activator activity | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
BP | GO:0009056 | catabolic process | IEP | Enrichment |
BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
BP | GO:0030163 | protein catabolic process | IEP | Enrichment |
BP | GO:0032507 | maintenance of protein location in cell | IEP | Enrichment |
MF | GO:0033218 | amide binding | IEP | Enrichment |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Enrichment |
MF | GO:0042277 | peptide binding | IEP | Enrichment |
BP | GO:0043647 | inositol phosphate metabolic process | IEP | Enrichment |
BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
BP | GO:0045185 | maintenance of protein location | IEP | Enrichment |
BP | GO:0046164 | alcohol catabolic process | IEP | Enrichment |
BP | GO:0046174 | polyol catabolic process | IEP | Enrichment |
BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Enrichment |
BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Enrichment |
MF | GO:0046923 | ER retention sequence binding | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
MF | GO:0051087 | chaperone binding | IEP | Enrichment |
BP | GO:0051235 | maintenance of location | IEP | Enrichment |
BP | GO:0051651 | maintenance of location in cell | IEP | Enrichment |
BP | GO:0051668 | localization within membrane | IEP | Enrichment |
MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0071545 | inositol phosphate catabolic process | IEP | Enrichment |
MF | GO:0071949 | FAD binding | IEP | Enrichment |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Enrichment |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 11 | 171 |
No external refs found! |