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  5. TP19G02030.1

TP19G02030.1


Description : ATPase, AAA-type, core; Vps4 oligomerisation, C-terminal; MIT; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP19G02030.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cre02.g079300 30786252, VPS4 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder
Cre12.g541300 30792645 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g650151 30777740 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.01 OrthoFinder
Cz04g31240.t1 No alias Vps4 oligomerisation, C-terminal; ATPase, AAA-type,... 0.03 OrthoFinder
PTI_01G09400.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
XM_002500459.1 MICPUN_80010, 80010 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
XM_002501909.1 MICPUN_97315, 97315 Microtubule-severing protein katanin 60kDa subunit (KAT1) 0.02 OrthoFinder
XM_003057534.1 MicpuC2_16445, 16445 Microtubule-severing protein katanin 60kDa subunit (KAT1) 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44343.1_2378 PRW44343 Vacuolar sorting-associated 4-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0008535 respiratory chain complex IV assembly IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Enrichment
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR015415 Vps4_C 369 419
IPR041569 AAA_lid_3 321 353
IPR003959 ATPase_AAA_core 165 296
IPR007330 MIT_dom 8 70
No external refs found!