TP19G00200.1

Description : Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Carboxylase, conserved domain; Pyruvate carboxyltransferase; Biotin carboxylase-like, N-terminal domain; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment [Interproscan].

Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TP19G00200.1
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
PTI_03G04110.1	No alias	Biotin/lipoyl attachment; Biotin carboxylase,...	0.02	OrthoFinder
PTI_23G01920.1	No alias	Biotin/lipoyl attachment; Biotin carboxylase-like,...	0.02	OrthoFinder
PTI_26G00480.1	No alias	Biotin/lipoyl attachment; Biotin carboxylase-like,...	0.04	OrthoFinder
Sro434_g142010.1	Contig783.g8758	Propionyl-CoA carboxylase, biotin carboxylase and...	0.07	OrthoFinder
lcl\|BLLF01000208.1_cds_GFH09088.1_3565	HaLaN_04167, GFH09088	Biotin carboxylase	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0006873	cellular ion homeostasis	IEP	Enrichment
BP	GO:0006875	cellular metal ion homeostasis	IEP	Enrichment
MF	GO:0008410	CoA-transferase activity	IEP	Enrichment
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
BP	GO:0019748	secondary metabolic process	IEP	Enrichment
BP	GO:0030003	cellular cation homeostasis	IEP	Enrichment
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Enrichment
BP	GO:0030638	polyketide metabolic process	IEP	Enrichment
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Enrichment
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Enrichment
BP	GO:0048878	chemical homeostasis	IEP	Enrichment
BP	GO:0050801	ion homeostasis	IEP	Enrichment
BP	GO:0055065	metal ion homeostasis	IEP	Enrichment
BP	GO:0055071	manganese ion homeostasis	IEP	Enrichment
BP	GO:0055076	transition metal ion homeostasis	IEP	Enrichment
BP	GO:0055080	cation homeostasis	IEP	Enrichment
BP	GO:0055082	cellular chemical homeostasis	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0098771	inorganic ion homeostasis	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000891	PYR_CT	640	900
IPR003379	Carboxylase_cons_dom	939	1143
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	195	402
IPR005482	Biotin_COase_C	419	525
IPR000089	Biotin_lipoyl	1206	1270
IPR005481	BC-like_N	81	189

External Links

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TP19G00200.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation