1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP18G02790.1

TP18G02790.1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0003264 (OrthoFinder) Phylogenetic Tree(s): OG0003264_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP18G02790.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cz04g25090.t1 No alias Hypothetical protein 0.02 OrthoFinder
OT_05G00470.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
PTI_01G06640.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Sro841_g209560.1 Contig2025.g17354 Periodic tryptophan protein 0.02 OrthoFinder
Transcript_contig_56847 56847 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 195 230
IPR001680 WD40_repeat 149 180
No external refs found!