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  5. TP18G01450.1

TP18G01450.1


Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP18G01450.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
EOD07752 No alias Chlorophyll A-B binding protein [Interproscan]. 0.12 OrthoFinder
EOD08157 No alias Light harvesting protein [Ensembl]. 0.13 OrthoFinder
EOD18950 No alias Light harvesting protein [Ensembl]. 0.13 OrthoFinder
EOD23225 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
EOD24660 No alias Light harvesting protein [Ensembl]. 0.12 OrthoFinder
EOD25560 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
EOD26056 No alias Light harvesting protein [Ensembl]. 0.09 OrthoFinder
EOD33861 No alias Light harvesting protein [Ensembl]. 0.1 OrthoFinder
PTI_02G04020.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
PTI_04G04620.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.2 OrthoFinder
PTI_15G00600.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.21 OrthoFinder
PTI_15G00620.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.15 OrthoFinder
Sro101_g051590.1 Contig348.g4712 Fucoxanthin-chlorophyll a-c binding protein 0.29 OrthoFinder
Sro1151_g246800.1 Contig4710.g35031 Chloroplastic 0.28 OrthoFinder
Sro122_g059170.1 Contig71.g736 Chloroplastic 0.02 OrthoFinder
Sro132_g062570.1 Contig2745.g22100 Chloroplastic 0.02 OrthoFinder
Sro1347_g264950.1 Contig4640.g34581 B binding protein 6, chloroplastic 0.01 OrthoFinder
Sro149_g068330.1 Contig259.g3201 Chloroplastic 0.01 OrthoFinder
Sro149_g068340.1 Contig259.g3202 B binding protein L1818, chloroplastic 0.01 OrthoFinder
Sro234_g094380.1 Contig3223.g25485 Fucoxanthin-chlorophyll a-c binding protein 0.31 OrthoFinder
Sro263_g102180.1 Contig612.g7540 Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic 0.31 OrthoFinder
Sro288_g108750.1 Contig62.g495 B binding protein L1818, chloroplastic 0.02 OrthoFinder
Sro453_g146050.1 Contig1693.g15162 B binding protein CP29 0.29 OrthoFinder
Sro60_g034620.1 Contig797.g8939 Chloroplastic 0.01 OrthoFinder
Sro652_g181650.1 Contig2024.g17318 Chloroplastic 0.02 OrthoFinder
Sro698_g189300.1 Contig480.g6500 Chlorophyll a 0.02 OrthoFinder
Sro698_g189330.1 Contig480.g6503 Chloroplastic 0.01 OrthoFinder
Sro829_g208070.1 Contig1016.g10166 Chloroplastic 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498066.1_7019 KAA8498066 Chlorophyll a-b binding protein of LHCII type III, chloroplastic 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499797.1_8750 KAA8499797 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496609.1_338 KAA8496609 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8493980.1_3844 KAA8493980 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492420.1_9113 KAA8492420 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491490.1_6300 KAA8491490 Fucoxanthin-chlorophyll a-c binding protein, chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 37 180
No external refs found!