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  5. TP15G01550.1

TP15G01550.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain; Helicase-associated domain [Interproscan].


Gene families : OG_01_0000129 (OrthoFinder) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP15G01550.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cz19g09190.t1 No alias Helicase, C-terminal; Domain of unknown function... 0.03 OrthoFinder
Dusal.1110s00005.1 33202839 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
EOD09487 No alias Helicase, C-terminal; Helicase-associated domain; Domain... 0.03 OrthoFinder
PTI_10G01300.1 No alias DEAD/DEAH box helicase domain [Interproscan]. 0.02 OrthoFinder
Sro1790_g297740.1 Contig4724.g35072 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 0.04 OrthoFinder
Sro303_g112430.1 Contig4655.g34653 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 0.03 OrthoFinder
Transcript_contig_56323 56323 Helicase-associated domain; Domain of unknown function... 0.01 OrthoFinder
Vocar.0002s0213.1 32890657 Domain of unknown function DUF1605; DEAD/DEAH box... 0.01 OrthoFinder
XM_002502784.1 MICPUN_82674, 82674 Helicase, C-terminal; Helicase-associated domain;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 478 541
IPR001650 Helicase_C 293 412
IPR011545 DEAD/DEAH_box_helicase_dom 25 182
No external refs found!