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  5. TP15G01420.1

TP15G01420.1


Description : Cyclin, N-terminal [Interproscan].


Gene families : OG_01_0000152 (OrthoFinder) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP15G01420.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Sro299_g111510.1 Contig1218.g11453 Diatom-specific cyclin 0.02 OrthoFinder
Sro374_g129180.1 Contig347.g4679 Diatom-specific cyclin 0.03 OrthoFinder
TP01G09460.1 No alias Cyclin, N-terminal [Interproscan]. 0.09 OrthoFinder
TP01G09470.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.04 OrthoFinder
TP04G00060.1 No alias Cyclin, N-terminal [Interproscan]. 0.04 OrthoFinder
TP13G00170.1 No alias Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
TP15G00060.1 No alias Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
TP15G00090.1 No alias Cyclin, N-terminal [Interproscan]. 0.04 OrthoFinder
TP15G00870.1 No alias Cyclin, N-terminal [Interproscan]. 0.04 OrthoFinder
TP15G00890.1 No alias Cyclin, N-terminal; Paramyxovirus structural protein... 0.02 OrthoFinder
TP19G00960.1 No alias Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
TP19G02130.1 No alias Cyclin, N-terminal [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000427.1_cds_GFH11698.1_6175 HaLaN_07242, GFH11698 A-type cyclin 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 53 166
No external refs found!