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Description : Ribosomal protein S25 [Interproscan].
Gene families : OG_01_0003067 (OrthoFinder) Phylogenetic Tree(s): OG0003067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP14G02860.1 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000037.5 | tig00000037_g10072.t1 | 40S ribosomal protein S25-4 OS=Arabidopsis thaliana | 0.14 | OrthoFinder | |
| Cre08.g382500 | 30773860, RPS25 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.38 | OrthoFinder | |
| Cz13g18280.t1 | No alias | Ribosomal protein S25 [Interproscan]. | 0.17 | OrthoFinder | |
| Dusal.0757s00001.1 | 33202066 | Ribosomal protein S25 [Interproscan]. | 0.11 | OrthoFinder | |
| EOD07030 | No alias | Ribosomal protein S25 [Interproscan]. | 0.04 | OrthoFinder | |
| EOD36091 | No alias | Ribosomal protein S25 [Interproscan]. | 0.04 | OrthoFinder | |
| OT_12G01700.1 | No alias | Ribosomal protein S25 [Interproscan]. | 0.18 | OrthoFinder | |
| PTI_11G01840.1 | No alias | Ribosomal protein S25 [Interproscan]. | 0.23 | OrthoFinder | |
| Sro1033_g233710.1 | Contig1396.g12845 | 40S ribosomal protein S25 | 0.4 | OrthoFinder | |
| SymbC1.scaffold3325.6 | 3325.6 | Ribosomal protein S25 [Interproscan]. | 0.05 | OrthoFinder | |
| Vocar.0042s0061.1 | 32892074 | Ribosomal protein S25 [Interproscan]. | 0.31 | OrthoFinder | |
| XM_002503070.1 | MICPUN_82663, 82663 | Ribosomal protein S25 [Interproscan]. | 0.25 | OrthoFinder | |
| XM_003061087.1 | MicpuC2_28202, 28202 | Ribosomal protein S25 [Interproscan]. | 0.13 | OrthoFinder | |
| lcl|BLLF01006863.1_cds_GFH32610.1_27087 | HaLaN_31855, GFH32610 | Ribosomal protein S25 [Interproscan]. | 0.07 | OrthoFinder | |
| lcl|LHPG02000022.1_cds_PRW20673.1_5214 | PRW20673 | 40S ribosomal S25-3 | 0.18 | OrthoFinder | |
| lcl|VRMN01000011.1_cds_KAA8491905.1_4913 | KAA8491905 | 40S ribosomal protein S25-4 | 0.34 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000030 | mannosyltransferase activity | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| MF | GO:0051287 | NAD binding | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004977 | Ribosomal_S25 | 6 | 104 |
| No external refs found! |