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  5. TP13G00170.1

TP13G00170.1


Description : Cyclin, N-terminal [Interproscan].


Gene families : OG_01_0000152 (OrthoFinder) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP13G00170.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
PTI_01G00040.1 No alias Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
PTI_25G00930.1 No alias Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
PTI_25G01350.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.01 OrthoFinder
PTI_28G00480.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.06 OrthoFinder
Sro1228_g254370.1 Contig2695.g21738 Cyclin-B2 0.03 OrthoFinder
Sro374_g129180.1 Contig347.g4679 Diatom-specific cyclin 0.01 OrthoFinder
TP02G02500.1 No alias Hypothetical protein 0.03 OrthoFinder
TP02G09980.1 No alias Cyclin, N-terminal [Interproscan]. 0.04 OrthoFinder
TP03G01530.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
TP03G07180.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
TP06G04320.1 No alias Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder
TP11G02790.1 No alias Hypothetical protein 0.02 OrthoFinder
TP15G01420.1 No alias Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
TP17G01540.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.03 OrthoFinder
TP19G00960.1 No alias Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder
TP19G02130.1 No alias Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 167 278
No external refs found!