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  5. TP12G02390.1

TP12G02390.1


Description : TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan].


Gene families : OG_01_0000819 (OrthoFinder) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP12G02390.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000350.28 tig00000350_g24328.t1 Chromatin organisation.chromatin remodeling... 0.06 OrthoFinder
Cpa|evm.model.tig00000836.8 tig00000836_g4692.t1 Chromatin organisation.chromatin remodeling... 0.05 OrthoFinder
Cz06g05110.t1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
OT_14G00130.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
PTI_06G00530.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
XM_003060424.1 MicpuC2_19130, 19130 Rvb1-like protein 0.05 OrthoFinder
XM_003063649.1 MicpuC2_44976, 44976 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000249.1_cds_GFH09635.1_4112 HaLaN_04814, GFH09635 RuvB-like helicase 0.02 OrthoFinder
lcl|BLLF01004324.1_cds_GFH29390.1_23867 HaLaN_28037, GFH29390 RuvB-like helicase 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39102.1_2725 PRW39102 RuvB-like 2 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041048 RuvB-like_C 374 439
IPR010339 TIP49_P-loop 14 368
No external refs found!