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Description : RNA 3'-terminal phosphate cyclase domain; RNA 3'-terminal phosphate cyclase, insert domain [Interproscan].
Gene families : OG_01_0003422 (OrthoFinder) Phylogenetic Tree(s): OG0003422_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP12G01230.1 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000989.39 | tig00000989_g6112.t1 | Probable RNA 3-terminal phosphate cyclase-like protein... | 0.01 | OrthoFinder | |
| Cre09.g400367 | 30780907, RCL1 | Probable RNA 3-terminal phosphate cyclase-like protein... | 0.1 | OrthoFinder | |
| Cz04g23040.t1 | No alias | RNA 3'-terminal phosphate cyclase, insert domain; RNA... | 0.04 | OrthoFinder | |
| OT_07G03570.1 | No alias | RNA 3'-terminal phosphate cyclase domain; RNA... | 0.06 | OrthoFinder | |
| PTI_19G00050.1 | No alias | RNA 3'-terminal phosphate cyclase, insert domain; RNA... | 0.05 | OrthoFinder | |
| Sro1551_g281780.1 | Contig1492.g13635 | Probable RNA 3'-terminal phosphate cyclase-like protein | 0.23 | OrthoFinder | |
| Transcript_contig_56315 | 56315 | RNA 3'-terminal phosphate cyclase domain; RNA... | 0.01 | OrthoFinder | |
| Vocar.0008s0398.1 | 32897193 | RNA 3'-terminal phosphate cyclase, insert domain; RNA... | 0.02 | OrthoFinder | |
| XM_002502767.1 | MICPUN_59207, 59207 | RNA 3'-terminal phosphate cyclase domain; RNA... | 0.15 | OrthoFinder | |
| lcl|BLLF01000253.1_cds_GFH09673.1_4150 | HaLaN_04858, GFH09673 | RNA 3'-terminal phosphate cyclase domain; RNA... | 0.01 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60321.1_4658 | PRW60321 | 18S rRNA biogenesis RCL1 | 0.11 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8496800.1_529 | KAA8496800 | Putative RNA 3'-terminal phosphate cyclase-like protein | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
| BP | GO:0031167 | rRNA methylation | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0070475 | rRNA base methylation | IEP | Enrichment |
| BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |