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  5. TP11G02080.1

TP11G02080.1


Description : ATPase, AAA-type, core; Replication factor C, C-terminal [Interproscan].


Gene families : OG_01_0003051 (OrthoFinder) Phylogenetic Tree(s): OG0003051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP11G02080.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Cre07.g337150 30774314, RFC2 Cell cycle.interphase.DNA... 0.02 OrthoFinder
PTI_22G00310.1 No alias Replication factor C, C-terminal; ATPase, AAA-type, core... 0.02 OrthoFinder
Sro730_g194110.1 Contig80.g843 Factor C subunit 2 0.02 OrthoFinder
Vocar.0023s0214.1 32883403 ATPase, AAA-type, core; Replication factor C, C-terminal... 0.02 OrthoFinder
lcl|BLLF01001259.1_cds_GFH18182.1_12659 HaLaN_14938, GFH18182 DNA replication factor C complex subunit 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 54 170
IPR013748 Rep_factorC_C 240 325
No external refs found!