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  5. TP11G01810.1

TP11G01810.1


Description : SNF2-related, N-terminal domain [Interproscan].


Gene families : OG_01_0002304 (OrthoFinder) Phylogenetic Tree(s): OG0002304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP11G01810.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.26 tig00000194_g14752.t1 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.05 OrthoFinder
Cpa|evm.model.tig00021501.9 tig00021501_g21949.t1 Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder
Cz03g19100.t1 No alias Helicase/SANT-associated domain; SNF2-related,... 0.02 OrthoFinder
PTI_08G02450.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.03 OrthoFinder
Sro757_g197940.1 Contig322.g4283 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 0.03 OrthoFinder
Transcript_contig_78945 78945 Hypothetical protein 0.03 OrthoFinder
XM_002504492.1 MICPUN_104934, 104934 SNF2 super family 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 29 263
No external refs found!