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  5. TP11G01460.1

TP11G01460.1


Description : RNA recognition motif domain; Galectin, carbohydrate recognition domain [Interproscan].


Gene families : OG_01_0020492 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP11G01460.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
PTI_28G00990.1 No alias Galectin, carbohydrate recognition domain; RNA... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004594 pantothenate kinase activity IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016073 snRNA metabolic process IEP Enrichment
BP GO:0016180 snRNA processing IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0019211 phosphatase activator activity IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034472 snRNA 3'-end processing IEP Enrichment
BP GO:0034477 U6 snRNA 3'-end processing IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0043628 ncRNA 3'-end processing IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR001079 Galectin_CRD 327 425
IPR000504 RRM_dom 482 549
No external refs found!