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  5. TP09G03000.1

TP09G03000.1


Description : Zinc finger, PHD-finger [Interproscan].


Gene families : OG_01_0004698 (OrthoFinder) Phylogenetic Tree(s): OG0004698_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP09G03000.1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Sro925_g220870.1 Contig3078.g24546 Chromodomain-helicase-DNA-binding protein 3 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 703 747
No external refs found!