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  5. TP09G02190.1

TP09G02190.1


Description : PPM-type phosphatase domain [Interproscan].


Gene families : OG_01_0000057 (OrthoFinder) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP09G02190.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.14 tig00000158_g10127.t1 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.03 OrthoFinder
Cz11g01170.t1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_894 894 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Vocar.0008s0131.1 32896939 PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 7 281
No external refs found!