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Description : 60s Acidic ribosomal protein [Interproscan].
Gene families : OG_01_0002401 (OrthoFinder) Phylogenetic Tree(s): OG0002401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP08G04160.1 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020830.75 | tig00020830_g14458.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder | |
| Cre02.g143050 | 30785883, RPP2 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | OrthoFinder | |
| Cz11g03220.t1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.17 | OrthoFinder | |
| Dusal.0521s00007.1 | 33197388 | 60s Acidic ribosomal protein [Interproscan]. | 0.04 | OrthoFinder | |
| EOD22996 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.04 | OrthoFinder | |
| OT_15G02430.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.05 | OrthoFinder | |
| PTI_20G01490.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.11 | OrthoFinder | |
| PTI_21G02280.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.12 | OrthoFinder | |
| Vocar.0054s0034.1 | 32894621 | 60s Acidic ribosomal protein [Interproscan]. | 0.11 | OrthoFinder | |
| XM_002504932.1 | MICPUN_106274, 106274 | 60s Acidic ribosomal protein [Interproscan]. | 0.08 | OrthoFinder | |
| lcl|LHPG02000015.1_cds_PRW34006.1_2819 | PRW34006 | 60S acidic ribosomal P2 | 0.05 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8494472.1_3002 | KAA8494472 | 60S acidic ribosomal protein P2 | 0.12 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8494747.1_3277 | KAA8494747 | 60S acidic ribosomal protein P2 | 0.08 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |