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  5. TP08G03500.1

TP08G03500.1


Description : Leucine-rich repeat; CHAT domain [Interproscan].


Gene families : OG_01_0006027 (OrthoFinder) Phylogenetic Tree(s): OG0006027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP08G03500.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
PTI_15G03350.1 No alias CHAT domain; Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder
Sro22_g015480.1 Contig426.g5772 CHAT domain; AAA+ ATPase domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 1506 1522
IPR024983 CHAT_dom 1815 1941
No external refs found!