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  5. TP07G04220.1

TP07G04220.1


Description : Reverse transcriptase domain; Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain [Interproscan].


Gene families : OG_01_0000060 (OrthoFinder) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP07G04220.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cz02g41150.t1 No alias Reverse transcriptase/retrotransposon-derived protein,... 0.02 OrthoFinder
Cz05g14160.t1 No alias Retroviral aspartyl protease; Retrotransposon gag... 0.02 OrthoFinder
Cz06g11150.t1 No alias Reverse transcriptase, RNase H-like domain; Integrase... 0.02 OrthoFinder
Cz11g01040.t1 No alias Reverse transcriptase/retrotransposon-derived protein,... 0.02 OrthoFinder
Cz15g18080.t1 No alias Chromo domain [Interproscan]. 0.02 OrthoFinder
UNPLg00342.t1 No alias Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 171 259
IPR000477 RT_dom 21 109
No external refs found!