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  5. TP07G02860.1

TP07G02860.1


Description : RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan].


Gene families : OG_01_0001598 (OrthoFinder) Phylogenetic Tree(s): OG0001598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP07G02860.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre15.g635800 30783526, SMC1 Structural maintenance of chromosomes protein 1... 0.02 OrthoFinder
Cz03g08190.t1 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
Cz03g08200.t1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
Dusal.0197s00008.1 33188527 SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
EOD19992 No alias SMCs flexible hinge; RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD19993 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
OT_03G03810.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.04 OrthoFinder
PTI_02G06300.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
Sro767_g199480.1 Contig2377.g19536 Of chromosomes protein 1A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR010935 SMC_hinge 517 637
IPR003395 RecF/RecN/SMC_N 4 1218
No external refs found!