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  5. TP07G00540.1

TP07G00540.1


Description : Vacuolar protein sorting-associated protein 13, second N-terminal domain; Vacuolar protein sorting-associated protein 13, SHR-binding domain; Vacuolar protein sorting-associated protein 13, C-terminal; Autophagy-related, C-terminal; VPS13, repeated coiled region [Interproscan].


Gene families : OG_01_0010043 (OrthoFinder) Phylogenetic Tree(s): OG0010043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP07G00540.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
PTI_15G02770.1 No alias Vacuolar protein sorting-associated protein 13,... 0.03 OrthoFinder
Sro490_g153480.1 Contig328.g4368 Putative vacuolar protein sorting-associated protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR015412 Autophagy-rel_C 4812 4889
IPR031645 VPS13_C 4655 4795
IPR031642 VPS13_mid_rpt 879 1076
IPR031646 VPS13_N2 310 625
IPR009543 SHR-BD 4058 4233
No external refs found!