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  5. TP07G00320.1

TP07G00320.1


Description : Srp40, C-terminal [Interproscan].


Gene families : OG_01_0005681 (OrthoFinder) Phylogenetic Tree(s): OG0005681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP07G00320.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cz09g13120.t1 No alias Srp40, C-terminal [Interproscan]. 0.02 OrthoFinder
EOD22360 No alias Srp40, C-terminal [Interproscan]. 0.03 OrthoFinder
Sro143_g066560.1 Contig3754.g28762 SRP40, C-terminal domain 0.07 OrthoFinder
Transcript_contig_79274 79274 Srp40, C-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0423.1 32885913 Srp40, C-terminal [Interproscan]. 0.02 OrthoFinder
XM_002500636.1 MICPUN_57299, 57299 Srp40, C-terminal [Interproscan]. 0.07 OrthoFinder
XM_003064318.1 MicpuC2_54293, 54293 Srp40, C-terminal [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59918.1_6289 PRW59918 Nucleolar and coiled-body phospho 1 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007718 Srp40_C 531 612
No external refs found!