1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP06G06480.1

TP06G06480.1


Description : Calreticulin/calnexin [Interproscan].


Gene families : OG_01_0001044 (OrthoFinder) Phylogenetic Tree(s): OG0001044_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G06480.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001527.11 tig00001527_g9262.t1 Calnexin homolog OS=Glycine max 0.01 OrthoFinder
Cre01.g038400 30788539, CRT2 Protein modification.protein folding and quality... 0.05 OrthoFinder
Cz06g13230.t1 No alias Calreticulin/calnexin [Interproscan]. 0.02 OrthoFinder
Dusal.0454s00001.1 33185680 Calreticulin/calnexin [Interproscan]. 0.06 OrthoFinder
EOD31103 No alias Calreticulin [Ensembl]. 0.02 OrthoFinder
PTI_28G00590.1 No alias Calreticulin/calnexin [Interproscan]. 0.09 OrthoFinder
Sro253_g099910.1 Contig3900.g29909 Calreticulin 0.05 OrthoFinder
XM_002499849.1 MICPUN_67567, 67567 Calreticulin/calnexin [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001580 Calret/calnex 265 340
IPR001580 Calret/calnex 21 262
No external refs found!