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  5. TP06G04660.1

TP06G04660.1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002693 (OrthoFinder) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G04660.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.20 tig00000157_g9607.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder
Cre03.g168450 30788210, CCT8 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder
Cz01g25210.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Cz01g25220.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
EOD37191 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
OT_03G03560.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
PTI_26G01550.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Sro163_g073140.1 Contig1793.g15847 Complex protein 1 subunit theta 0.04 OrthoFinder
Transcript_contig_54448 54448 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
Vocar.0040s0089.1 32886233 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
XM_002499420.1 MICPUN_104761, 104761 TCP-1/cpn60 chaperonin family protein (TCP-1) 0.06 OrthoFinder
lcl|BLLF01000604.1_cds_GFH13366.1_7843 HaLaN_09237, GFH13366 Chaperonin complex component 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56475.1_9784 PRW56475 T-complex 1 subunit theta 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491814.1_4822 KAA8491814 T-complex protein 1 subunit theta 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 40 538
No external refs found!