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  5. TP06G04150.1

TP06G04150.1


Description : Amino acid transporter, transmembrane domain [Interproscan].


Gene families : OG_01_0000223 (OrthoFinder) Phylogenetic Tree(s): OG0000223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G04150.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
EOD28396 No alias Amino acid transporter, transmembrane domain [Interproscan]. 0.02 OrthoFinder
PTI_08G03810.1 No alias Amino acid transporter, transmembrane domain [Interproscan]. 0.04 OrthoFinder
Sro719_g192320.1 Contig661.g7818 Putative sodium-coupled neutral amino acid transporter 11 0.02 OrthoFinder
SymbC1.scaffold4242.5 4242.5 Amino acid transporter, transmembrane domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold8948.3 8948.3 Amino acid transporter, transmembrane domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_2819 2819 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 69 463
No external refs found!