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  5. TP06G02670.1

TP06G02670.1


Description : LSM domain, eukaryotic/archaea-type [Interproscan].


Gene families : OG_01_0002761 (OrthoFinder) Phylogenetic Tree(s): OG0002761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G02670.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Sro194_g083010.1 Contig237.g2896 Small nuclear ribonucleoprotein E 0.03 OrthoFinder
Sro194_g083060.1 Contig237.g2901 Small nuclear ribonucleoprotein E 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 21 84
No external refs found!