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  5. TP06G02320.1

TP06G02320.1


Description : Ribosomal protein L22e [Interproscan].


Gene families : OG_01_0002253 (OrthoFinder) Phylogenetic Tree(s): OG0002253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G02320.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001206.7 tig00001206_g7490.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder
Cre07.g357850 30774301, RPL22 Protein biosynthesis.cytosolic ribosome.large subunit... 0.41 OrthoFinder
Cz08g30250.t1 No alias Ribosomal protein L22e [Interproscan]. 0.25 OrthoFinder
Dusal.0067s00003.1 33194677 Ribosomal protein L22e [Interproscan]. 0.28 OrthoFinder
EOD18860 No alias Ribosomal protein L22e [Interproscan]. 0.07 OrthoFinder
OT_12G02920.1 No alias Ribosomal protein L22e [Interproscan]. 0.15 OrthoFinder
PTI_20G02050.1 No alias Ribosomal protein L22e [Interproscan]. 0.34 OrthoFinder
Sro89_g046870.1 Contig3846.g29608 60S ribosomal protein L22 0.37 OrthoFinder
Transcript_contig_80087 80087 Ribosomal protein L22e [Interproscan]. 0.05 OrthoFinder
Vocar.0051s0045.1 32886996 Ribosomal protein L22e [Interproscan]. 0.23 OrthoFinder
XM_002499837.1 MICPUN_90144, 90144 Ribosomal protein L22e [Interproscan]. 0.27 OrthoFinder
XM_003055223.1 MicpuC2_31192, 31192 Ribosomal protein L22e [Interproscan]. 0.13 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39267.1_2590 PRW39267 60S ribosomal L22-2 0.3 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499191.1_8144 KAA8499191 60S ribosomal protein L22 0.22 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 10 119
No external refs found!