- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : TFIIEalpha/SarR/Rpc3 HTH domain [Interproscan].
Gene families : OG_01_0001989 (OrthoFinder) Phylogenetic Tree(s): OG0001989_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP06G01510.1 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_12G02480.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| Sro35_g022610.1 | Contig3323.g26138 | III subunit RPC3 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000030 | mannosyltransferase activity | IEP | Enrichment |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Enrichment |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0016485 | protein processing | IEP | Enrichment |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
| BP | GO:0051604 | protein maturation | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| MF | GO:0070403 | NAD+ binding | IEP | Enrichment |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024550 | TFIIEa/SarR/Rpc3_HTH_dom | 419 | 516 |
| No external refs found! |