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  5. TP05G07080.1

TP05G07080.1


Description : Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0108781 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G07080.1
Cluster HCCA: Cluster_98


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 570 630
IPR002885 Pentatricopeptide_repeat 269 322
IPR002885 Pentatricopeptide_repeat 389 457
No external refs found!