TP05G05560.1


Description : Alanyl-tRNA synthetase, class IIc, N-terminal; DHHA1 domain; Threonyl/alanyl tRNA synthetase, SAD [Interproscan].


Gene families : OG_01_0000762 (OrthoFinder) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G05560.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
OT_04G04780.1 No alias Threonyl/alanyl tRNA synthetase, SAD; Glutathione... 0.03 OrthoFinder
OT_07G01920.1 No alias Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA... 0.02 OrthoFinder
Sro372_g128770.1 Contig2891.g23057 Alanine--tRNA ligase 0.05 OrthoFinder
Vocar.0054s0042.1 32894613 DHHA1 domain; Threonyl/alanyl tRNA synthetase, SAD;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004813 alanine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006419 alanyl-tRNA aminoacylation IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 711 770
IPR018164 Ala-tRNA-synth_IIc_N 18 602
IPR003156 DHHA1_dom 837 964
No external refs found!