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  5. TP05G04710.1

TP05G04710.1


Description : MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan].


Gene families : OG_01_0000321 (OrthoFinder) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G04710.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.38 tig00000241_g20896.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.03 OrthoFinder
Cpa|evm.model.tig00020918.5 tig00020918_g15883.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.03 OrthoFinder
Cre03.g178650 30786765, MCM6 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.04 OrthoFinder
Cre10.g455850 30790894, MCM7 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.03 OrthoFinder
Cz01g28090.t1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain; Mcm6,... 0.02 OrthoFinder
Cz10g20280.t1 No alias MCM N-terminal domain; MCM, AAA-lid domain; MCM OB... 0.02 OrthoFinder
EOD16317 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.02 OrthoFinder
EOD19125 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.02 OrthoFinder
EOD29724 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.03 OrthoFinder
OT_01G02550.1 No alias MCM, AAA-lid domain; MCM OB domain; Mcm6, C-terminal... 0.03 OrthoFinder
OT_05G01710.1 No alias MCM, AAA-lid domain; MCM domain; MCM OB domain [Interproscan]. 0.02 OrthoFinder
PTI_06G04900.1 No alias MCM domain; MCM, AAA-lid domain; MCM OB domain [Interproscan]. 0.03 OrthoFinder
Sro397_g134560.1 Contig157.g1794 Helicase MCM9 0.02 OrthoFinder
Transcript_contig_56242 56242 MCM domain; MCM N-terminal domain; MCM OB domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_67540 67540 MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.01 OrthoFinder
Vocar.0028s0155.1 32895592 MCM, AAA-lid domain; MCM N-terminal domain; MCM OB... 0.02 OrthoFinder
XM_002507025.1 MICPUN_113427, 113427 Minichromosome maintenance Mcm7 (PRL) 0.02 OrthoFinder
lcl|BLLF01001170.1_cds_GFH17581.1_12058 HaLaN_14243, GFH17581 DNA replication licensing factor MCM7 0.03 OrthoFinder
lcl|BLLF01001600.1_cds_GFH20235.1_14712 HaLaN_17325, GFH20235 DNA helicase 0.02 OrthoFinder
lcl|BLLF01001900.1_cds_GFH21758.1_16235 HaLaN_19122, GFH21758 MCM domain-containing protein 0.01 OrthoFinder
lcl|BLLF01002739.1_cds_GFH25166.1_19643 HaLaN_23090, GFH25166 DNA helicase 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57124.1_9129 PRW57124 DNA replication licensing factor MCM7 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499259.1_8212 KAA8499259 DNA replication licensing factor mcm6 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006481 C-terminal protein methylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0018410 C-terminal protein amino acid modification IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043687 post-translational protein modification IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 205 425
IPR041562 MCM_lid 448 536
IPR033762 MCM_OB 29 160
No external refs found!