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Description : Exonuclease, RNase T/DNA polymerase III [Interproscan].
Gene families : OG_01_0002470 (OrthoFinder) Phylogenetic Tree(s): OG0002470_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP05G04680.1 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|VRMN01000009.1_cds_KAA8492636.1_9329 | KAA8492636 | PAB-dependent poly(A)-specific ribonuclease subunit PAN2 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Enrichment |
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0007154 | cell communication | IEP | Enrichment |
| BP | GO:0007155 | cell adhesion | IEP | Enrichment |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Enrichment |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
| BP | GO:0022610 | biological adhesion | IEP | Enrichment |
| CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Enrichment |
| CC | GO:0030131 | clathrin adaptor complex | IEP | Enrichment |
| CC | GO:0030896 | checkpoint clamp complex | IEP | Enrichment |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0042770 | signal transduction in response to DNA damage | IEP | Enrichment |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Enrichment |
| BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Enrichment |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013520 | Exonuclease_RNaseT/DNA_pol3 | 35 | 204 |
| No external refs found! |