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  5. TP05G02970.1

TP05G02970.1


Description : Ribosomal protein L44e [Interproscan].


Gene families : OG_01_0005313 (OrthoFinder) Phylogenetic Tree(s): OG0005313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G02970.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000489.11 tig00000489_g1370.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 OrthoFinder
Cre06.g310700 30778817, RPL36a Protein biosynthesis.cytosolic ribosome.large subunit... 0.28 OrthoFinder
Dusal.0071s00021.1 33185702 Ribosomal protein L44e [Interproscan]. 0.12 OrthoFinder
OT_17G00870.1 No alias Ribosomal protein L44e [Interproscan]. 0.22 OrthoFinder
PTI_05G04360.1 No alias Ribosomal protein L44e [Interproscan]. 0.22 OrthoFinder
Sro232_g093840.1 Contig4063.g31149 60S ribosomal protein L44 0.35 OrthoFinder
Vocar.0015s0086.1 32898998 Ribosomal protein L44e [Interproscan]. 0.23 OrthoFinder
XM_002508801.1 MICPUN_62094, 62094 Ribosomal protein L44 0.31 OrthoFinder
XM_003063940.1 MicpuC2_30148, 30148 Ribosomal protein L44e [Interproscan]. 0.12 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57355.1_8982 PRW57355 60S ribosomal L44 0.2 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496828.1_557 KAA8496828 60S ribosomal protein L44 Q 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 19 94
No external refs found!