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  5. TP04G07880.1

TP04G07880.1


Description : Proteasome, subunit alpha/beta; Proteasome alpha-subunit, N-terminal domain [Interproscan].


Gene families : OG_01_0003437 (OrthoFinder) Phylogenetic Tree(s): OG0003437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G07880.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.21 tig00020965_g16836.t1 Protein degradation.26S proteasome.20S core... 0.09 OrthoFinder
Cre10.g418100 30789792, POA3 Protein degradation.26S proteasome.20S core... 0.2 OrthoFinder
Cz12g21180.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.15 OrthoFinder
EOD41638 No alias Proteasome subunit alpha type [Ensembl]. 0.02 OrthoFinder
PTI_01G02920.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.26 OrthoFinder
Sro495_g154380.1 Contig3243.g25618 Proteasome subunit alpha type 0.27 OrthoFinder
SymbC1.scaffold12258.1 12258.1 Proteasome, subunit alpha/beta; Proteasome... 0.01 OrthoFinder
Transcript_contig_55753 55753 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
Vocar.0016s0001.1 32898033 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.07 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45558.1_1248 PRW45558 Proteasome subunit alpha type-4 0.06 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494414.1_2944 KAA8494414 Proteasome subunit alpha type-4-2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 5 27
IPR001353 Proteasome_sua/b 28 232
No external refs found!