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  5. TP04G07610.1

TP04G07610.1


Description : Ubiquitin-conjugating enzyme E2 [Interproscan].


Gene families : OG_01_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G07610.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.95 tig00020629_g12416.t1 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre01.g026600 30789061 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cz09g17240.t1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
Dusal.0417s00014.1 33193597 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_8667 8667 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!