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  5. TP04G07230.1

TP04G07230.1


Description : Heat shock factor (HSF)-type, DNA-binding [Interproscan].


Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G07230.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
PTI_05G02280.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
PTI_06G02420.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.03 OrthoFinder
PTI_12G00260.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.04 OrthoFinder
PTI_15G02560.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.04 OrthoFinder
PTI_23G00170.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.03 OrthoFinder
PTI_23G00270.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
PTI_23G00690.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
Sro1068_g237480.1 Contig852.g9367 Stress transcription factor B-2b 0.04 OrthoFinder
Sro1210_g252740.1 Contig2015.g17240 Stress transcription factor A 0.02 OrthoFinder
Sro1238_g255240.1 Contig4178.g31871 Shock factor protein 4 0.02 OrthoFinder
Sro1900_g304250.1 Contig3998.g30694 Stress transcription factor B-2b 0.02 OrthoFinder
Sro1900_g304260.1 Contig3998.g30695 Heat stress transcription factor 0.03 OrthoFinder
Sro769_g199870.1 Contig2367.g19489 Shock factor protein 0.03 OrthoFinder
TP04G06980.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.03 OrthoFinder
TP19G01020.1 No alias Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 112 202
No external refs found!