- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Ribosomal protein L36e [Interproscan].
Gene families : OG_01_0003108 (OrthoFinder) Phylogenetic Tree(s): OG0003108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP04G05720.1 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021493.69 | tig00021493_g21908.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.26 | OrthoFinder | |
| Cre12.g484050 | 30792099, RPL36 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.43 | OrthoFinder | |
| Cz06g33040.t1 | No alias | Ribosomal protein L36e [Interproscan]. | 0.34 | OrthoFinder | |
| Dusal.1916s00002.1 | 33187807 | Ribosomal protein L36e [Interproscan]. | 0.13 | OrthoFinder | |
| EOD30407 | No alias | Ribosomal protein L36e [Interproscan]. | 0.22 | OrthoFinder | |
| OT_02G00860.1 | No alias | Ribosomal protein L36e [Interproscan]. | 0.19 | OrthoFinder | |
| PTI_04G00610.1 | No alias | Ribosomal protein L36e [Interproscan]. | 0.43 | OrthoFinder | |
| Sro327_g118470.1 | Contig839.g9255 | 60S ribosomal protein L36 | 0.46 | OrthoFinder | |
| SymbC1.scaffold1291.12 | 1291.12 | Ribosomal protein L36e [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold1291.13 | 1291.13 | Ribosomal protein L36e [Interproscan]. | 0.06 | OrthoFinder | |
| Vocar.0031s0112.1 | 32890137 | Ribosomal protein L36e [Interproscan]. | 0.23 | OrthoFinder | |
| XM_002507094.1 | MICPUN_114038, 114038 | 60S ribosomal protein L36 (RPL36) | 0.28 | OrthoFinder | |
| XM_003056471.1 | MicpuC2_31782, 31782 | 60S ribosomal protein L36 (RPL36) | 0.04 | OrthoFinder | |
| lcl|LHPG02000008.1_cds_PRW56617.1_9463 | PRW56617 | 60S ribosomal L36-3-like | 0.21 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499503.1_8456 | KAA8499503 | 60S ribosomal protein L36-1 | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
| BP | GO:0006417 | regulation of translation | IEP | Enrichment |
| BP | GO:0006448 | regulation of translational elongation | IEP | Enrichment |
| BP | GO:0006449 | regulation of translational termination | IEP | Enrichment |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Enrichment |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Enrichment |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
| MF | GO:0043022 | ribosome binding | IEP | Enrichment |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
| BP | GO:0045727 | positive regulation of translation | IEP | Enrichment |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | Enrichment |
| BP | GO:0045905 | positive regulation of translational termination | IEP | Enrichment |
| BP | GO:0048518 | positive regulation of biological process | IEP | Enrichment |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Enrichment |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000509 | Ribosomal_L36e | 3 | 100 |
| No external refs found! |