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  5. Cpa|evm.model.tig00000241.149

Cpa|evm.model.tig00000241.149 (tig00000241_g21014.t1)


Aliases : tig00000241_g21014.t1

Description : Pheophytinase, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000584 (OrthoFinder) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000241.149
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Cre12.g558550 30792828 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g664350 30776947 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder
Cz06g04170.t1 No alias Alpha/beta hydrolase fold-1 [Interproscan]. 0.03 OrthoFinder
Cz06g15150.t1 No alias Alpha/beta hydrolase fold-1 [Interproscan]. 0.02 OrthoFinder
EOD12309 No alias Alpha/beta hydrolase fold-1 [Interproscan]. 0.01 OrthoFinder
EOD20499 No alias Alpha/beta hydrolase fold-1 [Interproscan]. 0.01 OrthoFinder
OT_04G02740.1 No alias Alpha/beta hydrolase fold-1 [Interproscan]. 0.02 OrthoFinder
Vocar.0041s0022.1 32888764 Alpha/beta hydrolase fold-1 [Interproscan]. 0.02 OrthoFinder
XM_003061112.1 MicpuC2_19619, 19619 Alpha/beta hydrolase fold-1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000125.1_cds_GFH07926.1_2403 HaLaN_02810, GFH07926 Alpha/beta hydrolase fold-1 [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495448.1_1446 KAA8495448 Pheophytinase, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006121 HMA_dom 52 106
IPR000073 AB_hydrolase_1 142 385
No external refs found!