- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Transport protein particle (TRAPP) component [Interproscan].
Gene families : OG_01_0002690 (OrthoFinder) Phylogenetic Tree(s): OG0002690_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP04G05020.1 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g145607 | 30787268, BET3 | Vesicle trafficking.target membrane tethering.TRAPP... | 0.02 | OrthoFinder | |
| Sro673_g185310.1 | Contig1386.g12796 | Protein particle complex subunit 3 | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000278 | mitotic cell cycle | IEP | Enrichment |
| CC | GO:0000775 | chromosome, centromeric region | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Enrichment |
| CC | GO:0005869 | dynactin complex | IEP | Enrichment |
| CC | GO:0005875 | microtubule associated complex | IEP | Enrichment |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Enrichment |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006839 | mitochondrial transport | IEP | Enrichment |
| BP | GO:0006848 | pyruvate transport | IEP | Enrichment |
| BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Enrichment |
| BP | GO:0007049 | cell cycle | IEP | Enrichment |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| BP | GO:0015711 | organic anion transport | IEP | Enrichment |
| BP | GO:0015718 | monocarboxylic acid transport | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| CC | GO:0019866 | organelle inner membrane | IEP | Enrichment |
| CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| BP | GO:0046942 | carboxylic acid transport | IEP | Enrichment |
| BP | GO:0098656 | anion transmembrane transport | IEP | Enrichment |
| CC | GO:0098687 | chromosomal region | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| BP | GO:1901475 | pyruvate transmembrane transport | IEP | Enrichment |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007194 | TRAPP_component | 26 | 185 |
| No external refs found! |