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  5. TP04G04250.1

TP04G04250.1


Description : Ribosomal protein S9 [Interproscan].


Gene families : OG_01_0003842 (OrthoFinder) Phylogenetic Tree(s): OG0003842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G04250.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000123.14 tig00000123_g6920.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.36 OrthoFinder
Cre13.g573351 30784543 Protein biosynthesis.cytosolic ribosome.small subunit... 0.49 OrthoFinder
Cz19g06110.t1 No alias Ribosomal protein S9 [Interproscan]. 0.07 OrthoFinder
Dusal.0024s00015.1 33202210 Ribosomal protein S9 [Interproscan]. 0.22 OrthoFinder
OT_05G03950.1 No alias Ribosomal protein S9 [Interproscan]. 0.28 OrthoFinder
PTI_01G05180.1 No alias Ribosomal protein S9 [Interproscan]. 0.42 OrthoFinder
Sro245_g097460.1 Contig3087.g24617 40S ribosomal protein S16 0.5 OrthoFinder
Transcript_contig_90600 90600 Ribosomal protein S9 [Interproscan]. 0.05 OrthoFinder
Vocar.0001s0196.1 32884947 Ribosomal protein S9 [Interproscan]. 0.16 OrthoFinder
XM_002500943.1 MICPUN_93705, 93705 Ribosomal protein S9 [Interproscan]. 0.44 OrthoFinder
XM_003056840.1 MicpuC2_62402, 62402 Ribosomal protein S9 [Interproscan]. 0.17 OrthoFinder
lcl|BLLF01003005.1_cds_GFH26056.1_20533 HaLaN_24137, GFH26056 Ribosomal protein S9 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01003770.1_cds_GFH28167.1_22644 HaLaN_26611, GFH28167 Ribosomal protein S9 [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57188.1_8811 PRW57188 40S ribosomal S16 0.41 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499795.1_8748 KAA8499795 40S ribosomal protein S16-1 0.31 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0006360 transcription by RNA polymerase I IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 11 143
No external refs found!