Description : RNA recognition motif domain [Interproscan].
Gene families : OG_01_0003158 (OrthoFinder) Phylogenetic Tree(s): OG0003158_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: TP04G04110.1 | |
Cluster | HCCA: Cluster_21 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000893.5 | tig00000893_g5348.t1 | No description available | 0.02 | OrthoFinder | |
Cre16.g685200 | 30778004 | No description available | 0.05 | OrthoFinder | |
Cz03g11190.t1 | No alias | RNA recognition motif domain [Interproscan]. | 0.09 | OrthoFinder | |
Dusal.0244s00016.1 | 33186516 | RNA recognition motif domain [Interproscan]. | 0.01 | OrthoFinder | |
EOD12070 | No alias | RNA recognition motif domain [Interproscan]. | 0.06 | OrthoFinder | |
OT_04G01770.1 | No alias | RNA recognition motif domain [Interproscan]. | 0.03 | OrthoFinder | |
PTI_10G00250.1 | No alias | RNA recognition motif domain [Interproscan]. | 0.14 | OrthoFinder | |
Sro737_g195080.1 | Contig1367.g12567 | Multiple RNA-binding domain-containing protein 1 | 0.12 | OrthoFinder | |
Vocar.0042s0105.1 | 32892088 | RNA recognition motif domain [Interproscan]. | 0.03 | OrthoFinder | |
XM_002501431.1 | MICPUN_81062, 81062 | RNA recognition motif domain [Interproscan]. | 0.12 | OrthoFinder | |
XM_003057974.1 | MicpuC2_16164, 16164 | RNA recognition motif domain [Interproscan]. | 0.04 | OrthoFinder | |
lcl|LHPG02000005.1_cds_PRW58148.1_7665 | PRW58148 | Multiple RNA-binding domain-containing 1 | 0.07 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495392.1_1390 | KAA8495392 | Multiple RNA-binding domain-containing protein 1 | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Enrichment |
BP | GO:0001510 | RNA methylation | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003725 | double-stranded RNA binding | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
MF | GO:0008897 | holo-[acyl-carrier-protein] synthase activity | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
BP | GO:0031167 | rRNA methylation | IEP | Enrichment |
CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
BP | GO:0032259 | methylation | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Enrichment |
BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
BP | GO:0070475 | rRNA base methylation | IEP | Enrichment |
BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Enrichment |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
No external refs found! |