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  5. TP04G02890.1

TP04G02890.1


Description : Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan].


Gene families : OG_01_0000476 (OrthoFinder) Phylogenetic Tree(s): OG0000476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G02890.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.67 tig00000076_g2367.t1 Cyclin-A2-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00000769.38 tig00000769_g4035.t1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 OrthoFinder
Cre03.g207900 30787688, CYCA1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 OrthoFinder
Cz01g07180.t1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder
Dusal.0008s00039.1 33198871 Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD13446 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder
EOD40142 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder
OT_01G06190.1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
PTI_09G01170.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.05 OrthoFinder
Sro251_g099220.1 Contig687.g8002 B-type cyclin 0.05 OrthoFinder
Sro331_g119100.1 Contig3186.g25147 B-type cyclin 0.02 OrthoFinder
Sro70_g038790.1 CYCB1 G2/mitotic-specific cyclin 0.03 OrthoFinder
lcl|BLLF01002678.1_cds_GFH24957.1_19434 HaLaN_22839, GFH24957 Cyclin N-terminal domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56788.1_9556 PRW56788 B-type cyclin isoform B 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495714.1_1712 KAA8495714 G2/mitotic-specific cyclin-A 0.07 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492954.1_2690 KAA8492954 Cyclin-B2-2 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 35 160
IPR004367 Cyclin_C-dom 163 276
No external refs found!