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  5. TP04G02670.1

TP04G02670.1


Description : Histone deacetylase domain; Ankyrin repeat-containing domain; Ankyrin repeats (many copies) [Interproscan].


Gene families : OG_01_0003460 (OrthoFinder) Phylogenetic Tree(s): OG0003460_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G02670.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_56252 56252 Ankyrin repeat-containing domain; Histone deacetylase... 0.01 OrthoFinder
Vocar.0027s0041.1 32887131 Histone deacetylase domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 285 535
IPR020683 Ankyrin_rpt-contain_dom 63 141
No external refs found!