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  5. TP04G00890.1

TP04G00890.1


Description : Leucine-rich repeat [Interproscan].


Gene families : OG_01_0003814 (OrthoFinder) Phylogenetic Tree(s): OG0003814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G00890.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Vocar.0048s0050.1 32893653 WPP domain; Leucine-rich repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 314 334
IPR001611 Leu-rich_rpt 340 362
IPR001611 Leu-rich_rpt 283 305
No external refs found!