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  5. TP04G00500.1

TP04G00500.1


Description : Krr1, KH1 domain [Interproscan].


Gene families : OG_01_0003475 (OrthoFinder) Phylogenetic Tree(s): OG0003475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G00500.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.6 tig00021357_g20739.t1 No description available 0.03 OrthoFinder
Cre12.g508200 30792238 No description available 0.12 OrthoFinder
Cz06g14270.t1 No alias Krr1, KH1 domain [Interproscan]. 0.04 OrthoFinder
EOD04858 No alias Krr1, KH1 domain [Interproscan]. 0.02 OrthoFinder
OT_07G04770.1 No alias Krr1, KH1 domain [Interproscan]. 0.06 OrthoFinder
PTI_07G00730.1 No alias Krr1, KH1 domain [Interproscan]. 0.1 OrthoFinder
Sro1263_g257280.1 Contig245.g2994 KRR1 small subunit processome component 0.11 OrthoFinder
Transcript_contig_66109 66109 Krr1, KH1 domain [Interproscan]. 0.02 OrthoFinder
Vocar.0016s0255.1 32898112 Krr1, KH1 domain [Interproscan]. 0.02 OrthoFinder
XM_002503549.1 MICPUN_83398, 83398 Krr1, KH1 domain [Interproscan]. 0.04 OrthoFinder
XM_003054949.1 MicpuC2_5117, 5117 Krr1, KH1 domain [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60059.1_6123 PRW60059 KRR1 small subunit processome component 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR041174 KH_8 64 144
No external refs found!