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Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP03G07570.1 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g548950 | 30793494, LHCBM7 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder | |
| Dusal.0017s00032.1 | 33200485 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0027s00004.1 | 33191535 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| Dusal.0081s00007.1 | 33198263 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0152s00006.1 | 33186191 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| OT_03G04960.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_09G04490.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_17G00760.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.17 | OrthoFinder | |
| PTI_20G01950.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.12 | OrthoFinder | |
| Sro975_g226790.1 | Contig3918.g30025 | B binding protein CP29 | 0.29 | OrthoFinder | |
| Sro98_g050410.1 | Contig3362.g26333 | Chloroplastic | 0.27 | OrthoFinder | |
| Transcript_contig_68125 | 68125 | Hypothetical protein | 0.01 | OrthoFinder | |
| Vocar.0001s0479.1 | 32885541 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0002s0281.1 | 32890560 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0007s0216.1 | 32888272 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0012s0172.1 | 32895002 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0014s0016.1 | 32888452 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000626.1_cds_GFH13553.1_8030 | HaLaN_09459, GFH13553 | Chlorophyll a-b binding protein, chloroplastic | 0.01 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW60030.1_6172 | PRW60030 | Chlorophyll a-b binding of LHCII type chloroplastic | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008484 | sulfuric ester hydrolase activity | IEP | Enrichment |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
| CC | GO:0009507 | chloroplast | IEP | Enrichment |
| CC | GO:0009536 | plastid | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | Enrichment |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0010242 | oxygen evolving activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Enrichment |
| BP | GO:0042549 | photosystem II stabilization | IEP | Enrichment |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Enrichment |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Enrichment |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0050897 | cobalt ion binding | IEP | Enrichment |
| BP | GO:0051202 | phytochromobilin metabolic process | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 43 | 198 |
| No external refs found! |