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  5. TP03G06260.1

TP03G06260.1


Description : Transcription factor, GTP-binding domain; GTP-binding protein LepA, C-terminal; Elongation factor EFG, domain V-like; Translation elongation factor EFTu-like, domain 2 [Interproscan].


Gene families : OG_01_0000765 (OrthoFinder) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G06260.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000912.22 tig00000912_g5427.t1 Translation factor GUF1 homolog, chloroplastic... 0.01 OrthoFinder
Cpa|evm.model.tig00021127.140 tig00021127_g18821.t1 Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor 0.02 OrthoFinder
Cre03.g165000 30786914 Translation factor GUF1 homolog, chloroplastic... 0.06 OrthoFinder
Cz01g20010.t1 No alias GTP-binding protein LepA, C-terminal; Elongation factor... 0.03 OrthoFinder
Cz01g27120.t1 No alias GTP-binding protein LepA, C-terminal; Elongation factor... 0.02 OrthoFinder
OT_06G03810.1 No alias Transcription factor, GTP-binding domain; Translation... 0.08 OrthoFinder
Sro188_g081210.1 Contig1383.g12722 Elongation factor 4 0.05 OrthoFinder
Sro371_g128610.1 Contig736.g8439 Elongation factor 4 0.03 OrthoFinder
SymbC1.scaffold2.187 2.187 Elongation factor EFG, domain V-like; Peptidase... 0.02 OrthoFinder
XM_002504651.1 MICPUN_84871, 84871 GTP-binding protein LepA, C-terminal; Elongation factor... 0.01 OrthoFinder
XM_002507800.1 MICPUN_60558, 60558 Protein-synthesizing GTPase (LEPA) 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000640 EFG_V-like 504 588
IPR000795 T_Tr_GTP-bd_dom 90 269
IPR013842 LepA_CTD 593 699
IPR004161 EFTu-like_2 293 363
No external refs found!