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  5. TP03G06030.1

TP03G06030.1


Description : ABC transporter-like; ABC-transporter extension domain [Interproscan].


Gene families : OG_01_0000347 (OrthoFinder) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G06030.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.83 tig00000194_g14815.t1 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre06.g265100 30779138 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre07.g335400 30774844 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz05g11180.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
Cz18g04250.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.03 OrthoFinder
EOD05643 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Sro1195_g251380.1 Contig4057.g31104 ATP-binding protein ChvD (Fragment) 0.02 OrthoFinder
Sro188_g081270.1 Contig1383.g12728 ATP-binding protein ChvD (Fragment) 0.03 OrthoFinder
Sro1_g000580.1 Contig3007.g23973 ATP-binding protein ChvD (Fragment) 0.06 OrthoFinder
SymbC1.scaffold540.7 540.7 ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
Vocar.0013s0253.1 32896303 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
XM_002499700.1 MICPUN_78779, 78779 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_002508755.1 MICPUN_106164, 106164 ATP-binding cassette superfamily 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 342 415
IPR003439 ABC_transporter-like_ATP-bd 453 587
IPR003439 ABC_transporter-like_ATP-bd 119 303
No external refs found!