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  5. TP03G04350.1

TP03G04350.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G04350.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Sro1131_g244680.1 Contig1944.g16712 Helicase 0.02 OrthoFinder
Sro307_g113450.1 Contig2839.g22815 Helicase 0.02 OrthoFinder
Sro30_g019670.1 Contig3962.g30367 Type III restriction enzyme, res subunit 0.01 OrthoFinder
SymbC1.scaffold2314.2 2314.2 Helicase/UvrB, N-terminal; Helicase-associated;... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 2 59
IPR005114 Helicase_assoc 70 136
No external refs found!